STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427825_02353Unannotated protein. (122 aa)    
Predicted Functional Partners:
GCA_000427825_02352
Unannotated protein.
       0.773
GCA_000427825_02354
Unannotated protein.
       0.773
GCA_000427825_02355
Unannotated protein.
       0.773
GCA_000427825_03222
Unannotated protein.
  
  
 0.555
GCA_000427825_02356
Unannotated protein.
       0.495
GCA_000427825_00662
Unannotated protein.
  
  
 0.456
GCA_000427825_01369
Unannotated protein.
 
     0.426
GCA_000427825_00403
Unannotated protein.
  
     0.418
Your Current Organism:
Thermocrispum municipale
NCBI taxonomy Id: 1111737
Other names: T. municipale DSM 44069, Thermocrispum municipale DSM 44069, Thermocrispum municipale IFO 15806, Thermocrispum municipale str. DSM 44069, Thermocrispum municipale strain DSM 44069
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.