STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prcAUnannotated protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (274 aa)    
Predicted Functional Partners:
GCA_000427905_02001
Unannotated protein.
 
 
 0.999
DIU77_15380
Unannotated protein.
 
 0.999
DIU77_19215
Unannotated protein.
  
 
 
 0.996
pup
Unannotated protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation.
 
 
 
 0.994
glpK
Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.982
DIU77_01910
Unannotated protein.
   
 0.980
pafA
Unannotated protein; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine.
   
 0.974
DIU77_07905
Unannotated protein.
   
 0.937
DIU77_03110
Unannotated protein; Belongs to the AAA ATPase family.
   
 0.802
DIU77_19350
Unannotated protein.
   
 0.802
Your Current Organism:
Thermocrispum agreste
NCBI taxonomy Id: 1111738
Other names: T. agreste DSM 44070, Thermocrispum agreste DSM 44070, Thermocrispum agreste str. DSM 44070, Thermocrispum agreste strain DSM 44070
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.