STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427905_02869Unannotated protein. (212 aa)    
Predicted Functional Partners:
DIU77_08820
Unannotated protein; Belongs to the GcvT family.
   
  0.732
DIU77_10410
Unannotated protein.
 
    
0.673
DIU77_02995
Unannotated protein.
    
  0.552
DIU77_02720
Unannotated protein; Belongs to the sigma-70 factor family.
 
     0.540
glyA
Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
  0.494
DIU77_02725
Unannotated protein.
       0.475
DIU77_03075
Unannotated protein.
    
 
 0.459
DIU77_10400
Unannotated protein.
   
   0.440
DIU77_10405
Unannotated protein.
       0.411
Your Current Organism:
Thermocrispum agreste
NCBI taxonomy Id: 1111738
Other names: T. agreste DSM 44070, Thermocrispum agreste DSM 44070, Thermocrispum agreste str. DSM 44070, Thermocrispum agreste strain DSM 44070
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.