STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000241465_01131Unannotated protein. (397 aa)    
Predicted Functional Partners:
GCA_000241465_00410
Unannotated protein.
 
 
 0.997
GCA_000241465_00797
Unannotated protein.
 
 
 0.996
GCA_000241465_01130
Unannotated protein.
 
 0.990
GCA_000241465_01904
Unannotated protein.
 
 
 0.985
GCA_000241465_01988
Unannotated protein.
 
  
 0.967
GCA_000241465_00590
Unannotated protein.
  
 
 0.953
GCA_000241465_01932
Unannotated protein.
 
 
 0.945
GCA_000241465_01482
Unannotated protein.
    
 0.912
GCA_000241465_03351
Unannotated protein.
  
 
 0.899
GCA_000241465_01385
Unannotated protein.
    
 0.894
Your Current Organism:
Sphingomonas echinoides
NCBI taxonomy Id: 1112212
Other names: S. echinoides ATCC 14820, Sphingomonas echinoides ATCC 14820, Sphingomonas echinoides str. ATCC 14820, Sphingomonas echinoides strain ATCC 14820
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.