STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cocE_2Cocaine esterase. (638 aa)    
Predicted Functional Partners:
GCA_000241485_00789
Hypothetical protein.
  
     0.706
GCA_000241485_01596
Hypothetical protein.
  
     0.667
GCA_000241485_02744
Bacterial leucyl aminopeptidase.
  
    0.584
argS
Arginine--tRNA ligase.
     
 0.579
phoK
Alkaline phosphatase PhoK.
  
     0.533
GCA_000241485_01597
Aminopeptidase S.
  
    0.518
GCA_000241485_00629
Hypothetical protein.
       0.511
dapE_3
Putative succinyl-diaminopimelate desuccinylase.
  
     0.454
dapE_1
Putative succinyl-diaminopimelate desuccinylase.
  
     0.433
GCA_000241485_01365
Hypothetical protein.
  
     0.429
Your Current Organism:
Sphingomonas sp. PAMC26605
NCBI taxonomy Id: 1112214
Other names: S. sp. PAMC 26605, Sphingomonas sp. PAMC 26605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.