STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobHPrecorrin-8X methylmutase. (209 aa)    
Predicted Functional Partners:
cobL
Precorrin-6Y C(5,15)-methyltransferase [decarboxylating].
 
 
 0.999
cobI
Precorrin-2 C(20)-methyltransferase.
 
 
 0.997
cobJ
Precorrin-3B C(17)-methyltransferase.
  
 0.997
GCA_000241485_03456
Hypothetical protein.
 
 0.993
cobB_2
Hydrogenobyrinate a,c-diamide synthase.
 
 
 0.987
cobK
Precorrin-6A reductase.
 
 
 0.985
cobM
Precorrin-4 C(11)-methyltransferase.
 
 
 0.985
GCA_000241485_03465
Hypothetical protein.
 
 
 0.978
cobQ
Cobyric acid synthase.
  
 0.972
cobN_2
Aerobic cobaltochelatase subunit CobN.
 
  
 0.962
Your Current Organism:
Sphingomonas sp. PAMC26605
NCBI taxonomy Id: 1112214
Other names: S. sp. PAMC 26605, Sphingomonas sp. PAMC 26605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.