STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000247645_00580Unannotated protein. (160 aa)    
Predicted Functional Partners:
GCA_000247645_00579
Unannotated protein.
     0.947
GCA_000247645_02261
Unannotated protein.
 
   
 0.643
GCA_000247645_00890
Unannotated protein.
  
     0.639
GCA_000247645_00581
Unannotated protein.
 
 
  0.629
GCA_000247645_02896
Unannotated protein.
  
     0.559
GCA_000247645_00578
Unannotated protein.
       0.533
GCA_000247645_00305
Unannotated protein.
  
     0.480
GCA_000247645_00582
Unannotated protein.
       0.446
GCA_000247645_00583
Unannotated protein.
       0.417
Your Current Organism:
Salinibacterium sp. PAMC21357
NCBI taxonomy Id: 1112215
Other names: S. sp. PAMC 21357, Salinibacterium sp. PAMC 21357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.