STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000247645_01035Unannotated protein. (780 aa)    
Predicted Functional Partners:
GCA_000247645_00005
Unannotated protein.
 
 
 
 0.898
GCA_000247645_01034
Unannotated protein.
 
     0.755
GCA_000247645_03062
Unannotated protein.
  
     0.748
GCA_000247645_01026
Unannotated protein.
  
     0.742
GCA_000247645_00941
Unannotated protein.
  
    0.703
GCA_000247645_00228
Unannotated protein.
  
     0.657
GCA_000247645_00976
Unannotated protein.
  
     0.652
GCA_000247645_01036
Unannotated protein.
  
    0.632
GCA_000247645_02150
Unannotated protein.
  
 
 0.619
GCA_000247645_02598
Unannotated protein.
  
 
 0.619
Your Current Organism:
Salinibacterium sp. PAMC21357
NCBI taxonomy Id: 1112215
Other names: S. sp. PAMC 21357, Salinibacterium sp. PAMC 21357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.