STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000247645_02267Unannotated protein. (145 aa)    
Predicted Functional Partners:
GCA_000247645_02268
Unannotated protein.
 
   
 0.821
GCA_000247645_00890
Unannotated protein.
  
     0.768
GCA_000247645_01341
Unannotated protein.
  
     0.767
GCA_000247645_00305
Unannotated protein.
  
     0.642
GCA_000247645_02266
Unannotated protein.
       0.466
GCA_000247645_02265
Unannotated protein.
       0.458
GCA_000247645_02263
Unannotated protein.
       0.421
GCA_000247645_02264
Unannotated protein.
       0.421
GCA_000247645_02259
Unannotated protein.
 
     0.402
Your Current Organism:
Salinibacterium sp. PAMC21357
NCBI taxonomy Id: 1112215
Other names: S. sp. PAMC 21357, Salinibacterium sp. PAMC 21357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.