STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000242835_03096Unannotated protein. (494 aa)    
Predicted Functional Partners:
GCA_000242835_03099
Unannotated protein.
   
 0.857
GCA_000242835_01751
Unannotated protein.
  
 
  0.843
GCA_000242835_04227
Unannotated protein.
  
  0.836
GCA_000242835_00348
Unannotated protein.
  
  0.822
GCA_000242835_01350
Unannotated protein.
    
  0.812
GCA_000242835_00783
Unannotated protein.
    
  0.800
GCA_000242835_00565
Unannotated protein.
   
  0.798
GCA_000242835_00594
Unannotated protein.
   
  0.798
GCA_000242835_01352
Unannotated protein.
   
  0.798
GCA_000242835_02044
Unannotated protein.
   
  0.798
Your Current Organism:
Sphingomonas sp. PAMC26617
NCBI taxonomy Id: 1112216
Other names: S. sp. PAMC 26617, Sphingomonas sp. PAMC 26617
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.