STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001602235_00257Unannotated protein. (184 aa)    
Predicted Functional Partners:
GCA_001602235_02489
Unannotated protein.
   
    0.871
GCA_001602235_03114
Unannotated protein.
   
    0.749
GCA_001602235_01661
Unannotated protein.
   
    0.689
GCA_001602235_01788
Unannotated protein.
   
    0.688
GCA_001602235_00265
Unannotated protein.
   
    0.687
GCA_001602235_03047
Unannotated protein.
   
    0.675
GCA_001602235_00258
Unannotated protein.
       0.584
GCA_001602235_00256
Unannotated protein.
       0.516
GCA_001602235_01961
Unannotated protein.
   
    0.511
GCA_001602235_03207
Unannotated protein.
  
    0.504
Your Current Organism:
Alcanivorax sp. NBRC102024
NCBI taxonomy Id: 1113895
Other names: A. sp. NBRC 102024, Alcanivorax sp. NBRC 102024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.