STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527095_00582Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_000527095_00579
Unannotated protein.
 
      0.872
GCA_000527095_00583
Unannotated protein.
       0.773
GCA_000527095_00584
Unannotated protein.
       0.773
GCA_000527095_00559
Unannotated protein.
  
  0.722
GCA_000527095_00525
Unannotated protein.
  
 
  0.717
GCA_000527095_01365
Unannotated protein.
    
 0.704
GCA_000527095_00181
Unannotated protein.
   
  0.669
GCA_000527095_00225
Unannotated protein.
   
  0.669
GCA_000527095_03115
Unannotated protein.
   
  0.669
GCA_000527095_00904
Unannotated protein.
   
  0.634
Your Current Organism:
Methylosarcina lacus
NCBI taxonomy Id: 1114263
Other names: M. lacus LW14, Methylosarcina lacus LW14, Methylosarcina lacus str. LW14, Methylosarcina lacus strain LW14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.