STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527095_03407Unannotated protein. (222 aa)    
Predicted Functional Partners:
GCA_000527095_02540
Unannotated protein.
  
 0.907
GCA_000527095_02539
Unannotated protein.
  
 
 0.846
GCA_000527095_03398
Unannotated protein.
 
     0.793
GCA_000527095_03403
Unannotated protein.
 
  
 0.766
GCA_000527095_00412
Unannotated protein.
  
 0.698
GCA_000527095_02545
Unannotated protein.
  
 0.698
GCA_000527095_03401
Unannotated protein.
  
 0.698
GCA_000527095_00413
Unannotated protein.
  
  
 0.621
GCA_000527095_02544
Unannotated protein.
  
  
 0.621
GCA_000527095_03400
Unannotated protein.
  
  
 0.621
Your Current Organism:
Methylosarcina lacus
NCBI taxonomy Id: 1114263
Other names: M. lacus LW14, Methylosarcina lacus LW14, Methylosarcina lacus str. LW14, Methylosarcina lacus strain LW14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.