STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C496_11662Unannotated protein. (243 aa)    
Predicted Functional Partners:
C496_11667
Unannotated protein.
       0.563
fumC
Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.526
C496_11672
Unannotated protein.
 
     0.526
C496_11657
Unannotated protein.
       0.514
C496_10921
Unannotated protein.
   
    0.505
C496_18338
Unannotated protein.
    
 0.503
C496_07078
Unannotated protein.
  
 
 0.468
C496_07023
Unannotated protein.
  
 
 0.468
C496_07918
Unannotated protein.
   
    0.463
C496_07073
Unannotated protein.
  
 
  0.460
Your Current Organism:
Natronorubrum tibetense
NCBI taxonomy Id: 1114856
Other names: N. tibetense GA33, Natronorubrum tibetense DSM 13204, Natronorubrum tibetense GA33, Natronorubrum tibetense str. GA33, Natronorubrum tibetense strain GA33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.