STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spaf_0888ABC transporter-like protein. (271 aa)    
Predicted Functional Partners:
Spaf_0887
Hypothetical protein.
 
  
 0.960
Spaf_0889
Putative transcriptional regulatory protein.
 
    0.944
Spaf_0180
ABC-type multidrug transport system, ATPase component.
 
    
0.913
Spaf_1310
Multidrug ABC transporter, ATP-binding protein.
  
  0.699
Spaf_1870
ABC transporter.
  
  0.497
Spaf_0884
ABC exporter ATP binding/membrane-spanning protein.
  
  0.462
metN
ABC-type metal ion transport system, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.449
Spaf_1970
Bacteriocin ABC-type exporter, ATP binding/permease protein.
  
  0.417
Your Current Organism:
Streptococcus parasanguinis
NCBI taxonomy Id: 1114965
Other names: S. parasanguinis FW213, Streptococcus parasanguinis FW213, Streptococcus parasanguinis str. FW213, Streptococcus parasanguinis strain FW213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.