STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL53860.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
KRL53859.1
Multidrug transport protein; Belongs to the major facilitator superfamily.
 
    0.880
KRL53950.1
Hypothetical protein.
 
  
 0.835
KRL52577.1
Hypothetical protein.
 
    0.673
KRL53858.1
Hypothetical protein.
       0.551
KRL53437.1
Permease.
  
     0.551
KRL53949.1
Major facilitator superfamily permease.
 
    0.515
KRL56974.1
Lipoprotein.
   
    0.508
KRL57393.1
Nucleoside deoxyribosyltransferase.
  
     0.479
KRL53857.1
Cell surface hydrolase, membrane-bound.
       0.434
KRL55019.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.