STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL53450.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
KRL53448.1
Phosphotransferase system galacitol-specific IIA domain-containing protein.
 
 
 0.999
KRL53449.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC.1.
 
 
 0.979
KRL53447.1
Hypothetical protein.
  
 
 0.963
KRL54505.1
Galacitol PTS, EIIC.
 
 
 0.947
KRL52593.1
Hypothetical protein.
    
  0.928
KRL56087.1
PTS system galactitol-specific IIC component.
 
 
 0.909
KRL53446.1
HTH domain protein.
 
 
  0.904
KRL57028.1
Hypothetical protein.
 
 
 0.821
KRL55884.1
Hypothetical protein.
 
 
 0.775
KRL53803.1
N-acetylglucosamine and glucose PTS, EIICBA.
     
 0.566
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.