STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL56990.1Hypothetical protein. (2624 aa)    
Predicted Functional Partners:
KRL54575.1
Hypothetical protein.
  
     0.545
KRL52901.1
Hypothetical protein.
  
     0.531
KRL56850.1
Lipopolysaccharide biosynthesis glycosyltransferase.
  
     0.481
pcp
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
       0.463
KRL56161.1
uroporphyrinogen-III C-methyltransferase.
     
 0.462
KRL55041.1
Cell surface protein.
  
     0.442
KRL54014.1
Hypothetical protein.
  
     0.437
KRL53618.1
Hypothetical protein.
  
     0.427
KRL56986.1
Hypothetical protein.
  
     0.416
KRL56848.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.