STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL52965.1Glycosyltransferase, group 1 family protein. (500 aa)    
Predicted Functional Partners:
KRL52964.1
Glycosyltransferase, group 1 family protein.
 
    
0.803
KRL55841.1
Hypothetical protein.
  
 
 0.623
KRL53857.1
Cell surface hydrolase, membrane-bound.
    
   0.591
KRL53296.1
Hypothetical protein.
    
   0.591
KRL55009.1
Cell surface hydrolase, membrane-bound.
    
   0.591
KRL56465.1
UDP-galactopyranose mutase.
  
 
 0.576
polA
Dna polymerase i; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.506
KRL56457.1
Hypothetical protein.
  
 
 0.501
KRL57174.1
ATP-dependent helicase RecQ.
    
   0.489
KRL53773.1
recQ protein.
    
   0.489
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.