STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL56672.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
KRL56674.1
Hypothetical protein.
       0.777
KRL56673.1
Hypothetical protein.
       0.773
KRL56675.1
Hypothetical protein.
       0.773
KRL56671.1
Hypothetical protein.
       0.754
KRL56669.1
Hypothetical protein.
  
    0.732
KRL56670.1
Hypothetical protein.
       0.720
KRL56676.1
Hypothetical protein.
  
    0.686
KRL56677.1
Hypothetical protein.
       0.555
KRL56666.1
Prophage Lp1 protein 39.
  
    0.542
KRL56665.1
PBSX family phage terminase large subunit.
  
    0.525
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.