STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL52745.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
KRL52744.1
Hypothetical protein.
       0.780
KRL57405.1
Hypothetical protein.
  
  0.754
KRL57245.1
ABC transporter ATP-binding membrane spanning permease - possible multidrug resistance.
  
  0.739
KRL56547.1
ABC transporter.
  
  0.711
KRL53678.1
ABC superfamily ATP binding cassette transporter, membrane protein.
  
  0.681
KRL53456.1
ABC superfamily ATP binding cassette transporter, membrane protein.
  
  0.681
KRL53457.1
ABC superfamily ATP binding cassette transporter, membrane protein.
  
  0.681
atpD
ATP synthase F1 sector subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.586
atpA
Atp synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.585
atpG
ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.579
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.