STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL55024.1Transcriptional regulator. (157 aa)    
Predicted Functional Partners:
KRL55023.1
Dna helicase.
       0.615
KRL57483.1
Hypothetical protein.
  
     0.604
KRL54196.1
Cysteine desulfurase.
  
 
 0.591
KRL56220.1
Cysteine desulfurase.
  
 
 0.591
KRL55841.1
Hypothetical protein.
  
     0.568
KRL53459.1
Transcriptional regulator.
  
    0.537
KRL53366.1
Hypothetical protein.
  
     0.529
KRL53365.1
Hypothetical protein.
  
     0.518
KRL53100.1
Oxidoreductase.
  
  
 0.477
KRL56413.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.