STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL54520.1Transcriptional regulator, RpiR family. (281 aa)    
Predicted Functional Partners:
KRL53803.1
N-acetylglucosamine and glucose PTS, EIICBA.
  
 
 0.983
KRL54518.1
PTS family L-ascorbate (L-asc) porter component IIC.
 
     0.600
KRL54517.1
PTS system, Lactose Cellobiose specific IIB subunit.
 
     0.552
KRL54508.1
Keto-hydroxyglutarate-aldolase keto-deoxy-phosphogluconate aldolase.
 
  
 0.550
KRL54519.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
       0.515
KRL53041.1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.495
KRL54516.1
Hypothetical protein.
       0.440
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.431
KRL57004.1
Transcriptional regulator.
  
     0.416
Your Current Organism:
Lactobacillus rossiae
NCBI taxonomy Id: 1114972
Other names: L. rossiae DSM 15814, Lactobacillus rossiae DSM 15814, Lactobacillus rossiae str. DSM 15814, Lactobacillus rossiae strain DSM 15814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.