STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycaDMajor facilitator superfamily transporter YcaD. (382 aa)    
Predicted Functional Partners:
mlaB
Putative phospholipid ABC transporter substrate-binding periplasmic protein MlaB.
  
     0.581
ydgH
Hypothetical protein YdgH.
  
     0.490
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.479
yajG
Hypothetical protein YajG.
  
     0.470
cpxP
Periplasmic protein CpxP.
  
 
   0.467
aas
2-acylglycerophosphoethanolamine acyltransferase/acyl-[acyl-carrier-protein] synthetase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.465
tsgA
Protein TsgA.
  
     0.455
zapC
Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.453
aaeX
Protein AaeX.
  
     0.452
pheA
Chorismate mutase/prephenate dehydratase.
   
 
 0.450
Your Current Organism:
Pseudescherichia vulneris
NCBI taxonomy Id: 1115515
Other names: Escherichia vulneris NBRC 102420, P. vulneris NBRC 102420, Pseudescherichia vulneris NBRC 102420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.