STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvAThreonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (514 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.978
ilvH
Acetolactate synthase III small subunit.
 
 
 0.974
ilvN
Acetolactate synthase I small subunit.
  
 
 0.967
thrC
Threonine synthase.
  
 
 0.963
ilvG
Acetolactate synthase II large subunit.
 
 0.962
ilvM
Acetolactate synthase II small subunit.
  
 
 0.957
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.954
ilvI
Acetolactate synthase III large subunit.
 
 0.908
ilvB
Acetolactate synthase I large subunit.
 
 0.907
metL
Aspartokinase/homoserine dehydrogenase MetL; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
 
 0.893
Your Current Organism:
Pseudescherichia vulneris
NCBI taxonomy Id: 1115515
Other names: Escherichia vulneris NBRC 102420, P. vulneris NBRC 102420, Pseudescherichia vulneris NBRC 102420
Server load: low (20%) [HD]