STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001870905_01795Unannotated protein. (332 aa)    
Predicted Functional Partners:
GCA_001870905_02346
Unannotated protein.
 
 
 0.992
GCA_001870905_01733
Unannotated protein.
    
 0.847
GCA_001870905_03415
Unannotated protein.
    
  0.809
GCA_001870905_03724
Unannotated protein.
   
  
 0.669
GCA_001870905_03384
Unannotated protein.
    
 0.663
GCA_001870905_03521
Unannotated protein.
    
 0.663
GCA_001870905_02751
Unannotated protein.
 
 
 0.634
GCA_001870905_00470
Unannotated protein.
    
  0.617
GCA_001870905_00777
Unannotated protein.
  
    0.535
GCA_001870905_01271
Unannotated protein.
 
    0.523
Your Current Organism:
Geitlerinema sp. PCC9228
NCBI taxonomy Id: 111611
Other names: G. sp. PCC 9228, Geitlerinema sp. PCC 9228
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.