STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001870905_01837Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_001870905_03485
Unannotated protein.
 
 0.996
GCA_001870905_00670
Unannotated protein.
 
 0.923
GCA_001870905_00591
Unannotated protein.
 
 
 0.916
GCA_001870905_00091
Unannotated protein.
  
  
 0.785
GCA_001870905_03351
Unannotated protein.
  
 
 0.717
GCA_001870905_01814
Unannotated protein.
 
  
 0.615
GCA_001870905_01902
Unannotated protein.
  
 
 0.554
GCA_001870905_01514
Unannotated protein.
  
  
 
0.534
GCA_001870905_00084
Unannotated protein.
    
 0.530
GCA_001870905_02548
Unannotated protein.
  
  
 0.458
Your Current Organism:
Geitlerinema sp. PCC9228
NCBI taxonomy Id: 111611
Other names: G. sp. PCC 9228, Geitlerinema sp. PCC 9228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.