STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001870905_02220Unannotated protein. (357 aa)    
Predicted Functional Partners:
GCA_001870905_03565
Unannotated protein.
    
  0.601
GCA_001870905_02221
Unannotated protein.
       0.536
GCA_001870905_02219
Unannotated protein.
       0.466
GCA_001870905_01385
Unannotated protein.
    
  0.464
GCA_001870905_03494
Unannotated protein.
    
  0.459
GCA_001870905_02630
Unannotated protein.
   
 
  0.455
GCA_001870905_02222
Unannotated protein.
       0.445
GCA_001870905_02128
Unannotated protein.
    
  0.435
GCA_001870905_01426
Unannotated protein.
   
 
 0.431
GCA_001870905_02947
Unannotated protein.
  
  
  0.430
Your Current Organism:
Geitlerinema sp. PCC9228
NCBI taxonomy Id: 111611
Other names: G. sp. PCC 9228, Geitlerinema sp. PCC 9228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.