STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001870905_02653Unannotated protein. (420 aa)    
Predicted Functional Partners:
GCA_001870905_02654
Unannotated protein.
       0.783
GCA_001870905_02651
Unannotated protein.
       0.773
GCA_001870905_02652
Unannotated protein.
       0.773
GCA_001870905_02650
Unannotated protein.
    
  0.721
GCA_001870905_02655
Unannotated protein.
       0.610
GCA_001870905_02658
Unannotated protein.
    
  0.484
GCA_001870905_02649
Unannotated protein.
       0.476
GCA_001870905_02728
Unannotated protein.
     
 0.460
GCA_001870905_02731
Unannotated protein.
  
  
 0.432
GCA_001870905_02648
Unannotated protein.
       0.429
Your Current Organism:
Geitlerinema sp. PCC9228
NCBI taxonomy Id: 111611
Other names: G. sp. PCC 9228, Geitlerinema sp. PCC 9228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.