STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001870905_02942Unannotated protein. (441 aa)    
Predicted Functional Partners:
GCA_001870905_00120
Unannotated protein.
  
 
 0.902
GCA_001870905_02226
Unannotated protein.
  
 0.887
GCA_001870905_02948
Unannotated protein.
   
 
 0.835
GCA_001870905_01858
Unannotated protein.
  
 
 0.780
GCA_001870905_02941
Unannotated protein.
       0.773
GCA_001870905_03370
Unannotated protein.
    
 0.762
GCA_001870905_03193
Unannotated protein.
  
     0.748
GCA_001870905_00191
Unannotated protein.
  
     0.747
GCA_001870905_00091
Unannotated protein.
 
 
 0.742
GCA_001870905_01889
Unannotated protein.
  
 
 0.725
Your Current Organism:
Geitlerinema sp. PCC9228
NCBI taxonomy Id: 111611
Other names: G. sp. PCC 9228, Geitlerinema sp. PCC 9228
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.