STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001870905_03145Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_001870905_01684
Unannotated protein.
     
 0.797
GCA_001870905_03146
Unannotated protein.
       0.752
GCA_001870905_01289
Unannotated protein.
     
 0.730
GCA_001870905_01278
Unannotated protein.
     
 0.720
GCA_001870905_03101
Unannotated protein.
     
 0.673
GCA_001870905_01496
Unannotated protein.
     
 0.660
GCA_001870905_01720
Unannotated protein.
  
  
  0.572
GCA_001870905_03144
Unannotated protein.
       0.523
GCA_001870905_03143
Unannotated protein.
       0.510
GCA_001870905_03147
Unannotated protein.
       0.504
Your Current Organism:
Geitlerinema sp. PCC9228
NCBI taxonomy Id: 111611
Other names: G. sp. PCC 9228, Geitlerinema sp. PCC 9228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.