STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdkThymidine kinase. (194 aa)    
Predicted Functional Partners:
deoD
Purine nucleoside phosphorylase.
  
 
 0.953
tmk
Thymidylate kinase.
  
 
 0.938
ychF
GTP-binding and nucleic acid-binding protein YchF.
  
    0.844
lepA
Translation elongation factor LepA.
  
    0.685
MHM_00340
Hypothetical protein (homolog to MSU_0067).
       0.623
prfA
Peptide chain release factor 1.
  
  
 0.607
manB
Phosphohexosemutase.
     
 0.593
trpS
tryptophanyl-tRNA synthetase.
       0.581
pyrG
CTP synthase.
  
  
 0.554
tpiA
Triosephosphate isomerase.
     
 0.534
Your Current Organism:
Mycoplasma haemominutum
NCBI taxonomy Id: 1116213
Other names: C. Mycoplasma haemominutum 'Birmingham 1', Candidatus Mycoplasma haemominutum 'Birmingham 1'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.