STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potDPolyamine (spermidine/putrescine) substrate binding protein in Mollicutes. (448 aa)    
Predicted Functional Partners:
potB
Polyamine (spermidine/putrescine) ABC transporter permease protein PotB.
  
 
 0.989
potC
Polyamine (spermidine/putrescine) ABC transporter permease protein PotC.
  
 
 0.989
potA
Polyamine (spermidine/putrescine) ABC transporter ATP-binding protein.
    
 0.977
metK
S-adenosylmethionine synthetase.
     
 0.835
gcp
O-sialoglycoprotein endopeptidase.
     
 0.833
pheS
phenylalanyl-tRNA synthetase, alpha chain.
  
    0.832
MHM_00510
Hypothetical protein (homolog to MSU_0084).
       0.785
phoU
Phosphate transport system regulatory protein.
       0.655
MHM_00540
ABC transporter, ATP binding protein.
       0.647
MHM_00530
Hypothetical protein (homolog to MSU_0086).
       0.641
Your Current Organism:
Mycoplasma haemominutum
NCBI taxonomy Id: 1116213
Other names: C. Mycoplasma haemominutum 'Birmingham 1', Candidatus Mycoplasma haemominutum 'Birmingham 1'
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