STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
obgEGTP-binding protein Obg. (381 aa)    
Predicted Functional Partners:
rplK
Ribosomal protein L11.
  
 
 0.929
rpmA
Ribosomal protein L27.
  
 
 0.913
rplT
Ribosomal protein L20.
  
 
 0.904
rplU
Ribosomal protein L21.
  
 
 0.896
rplQ
Ribosomal protein L17.
  
 
 0.886
rpmF
Ribosomal protein L32.
  
 
 0.882
infB
Translation initiation factor 2.
  
 
 0.875
rplS
Ribosomal protein L19.
  
 
 0.872
rpmG
Ribosomal protein L33.
   
   0.859
rplM
Ribosomal protein L13.
  
 
 0.853
Your Current Organism:
Mycoplasma haemominutum
NCBI taxonomy Id: 1116213
Other names: C. Mycoplasma haemominutum 'Birmingham 1', Candidatus Mycoplasma haemominutum 'Birmingham 1'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.