STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
secAProtein translocase subunit SecA. (801 aa)    
Predicted Functional Partners:
secY
Preprotein translocase subunit SecY.
   
 0.998
secG
Putative protein-export membrane protein SecG.
   
 
 0.980
oxaA
Membrane protein OxaA.
  
 
 0.950
ffh
Signal recognition particle protein.
    
 0.945
ftsY
Signal recognition particle receptor protein FtsY, alpha subunit.
    
 0.944
rplW
Ribosomal protein L23.
   
   0.782
rpmC
Ribosomal protein L29.
   
   0.776
exo
DNA polymerase I: 5'-3' exonuclease.
  
  
 0.761
rplV
Ribosomal protein L22.
  
 
 0.752
MHM_04640
RNA polymerase factor sigma-70, ECF subfamily.
       0.736
Your Current Organism:
Mycoplasma haemominutum
NCBI taxonomy Id: 1116213
Other names: C. Mycoplasma haemominutum 'Birmingham 1', Candidatus Mycoplasma haemominutum 'Birmingham 1'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.