STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrSthreonyl-tRNA synthetase. (425 aa)    
Predicted Functional Partners:
rpsO
Ribosomal protein S15.
  
 
 0.963
rplO
Ribosomal protein L15.
   
 
 0.961
infB
Translation initiation factor 2.
  
 0.955
rplK
Ribosomal protein L11.
  
 
 0.944
rpsN
Ribosomal protein S14.
   
 
 0.940
rplC
Ribosomal protein L3.
   
 
 0.926
rplV
Ribosomal protein L22.
   
 
 0.921
rpmF
Ribosomal protein L32.
  
   0.910
rplT
Ribosomal protein L20.
 
 
 0.905
metG
methionyl-tRNA synthetase.
  
 
 0.892
Your Current Organism:
Mycoplasma haemominutum
NCBI taxonomy Id: 1116213
Other names: C. Mycoplasma haemominutum 'Birmingham 1', Candidatus Mycoplasma haemominutum 'Birmingham 1'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.