STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLAREA_05520P-loop containing nucleoside triphosphate hydrolase. (359 aa)    
Predicted Functional Partners:
GLAREA_01587
CCCH zinc finger.
   
 
 0.997
GLAREA_07627
UBC-like protein.
   
 
 0.945
GLAREA_01072
Ribosomal proteins S24e, L23 and L15e.
   
   0.767
GLAREA_07603
Ribosomal protein S3 C-terminal; Belongs to the universal ribosomal protein uS3 family.
   
   0.757
GLAREA_01338
P-loop containing nucleoside triphosphate hydrolase.
   
 
 0.749
GLAREA_07101
Translation proteins SH3-like protein.
   
 
 0.744
GLAREA_00743
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
   0.743
GLAREA_10317
Ribosomal protein L30p/L7e.
   
   0.725
GLAREA_09361
ARM repeat-containing protein.
   
 
 0.724
GLAREA_05719
P-loop containing nucleoside triphosphate hydrolase; Belongs to the AAA ATPase family.
  
    0.710
Your Current Organism:
Glarea lozoyensis
NCBI taxonomy Id: 1116229
Other names: G. lozoyensis ATCC 20868, Glarea lozoyensis ATCC 20868
Server load: low (12%) [HD]