STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000372965_01576Unannotated protein. (366 aa)    
Predicted Functional Partners:
GCA_000372965_01575
Unannotated protein.
       0.565
GCA_000372965_03828
Unannotated protein.
  
 
 0.531
GCA_000372965_05639
Unannotated protein.
  
 
 0.531
GCA_000372965_05707
Unannotated protein.
  
 
 0.531
GCA_000372965_05361
Unannotated protein.
  
  0.489
GCA_000372965_01854
Unannotated protein.
  
  0.486
GCA_000372965_00927
Unannotated protein.
  
  0.485
GCA_000372965_05469
Unannotated protein.
  
  0.462
GCA_000372965_02586
Unannotated protein.
     
 0.445
GCA_000372965_01875
Unannotated protein.
    
  0.436
Your Current Organism:
Hoeflea sp. 108
NCBI taxonomy Id: 1116369
Other names: H. sp. 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.