STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFC31314.1Le51; Belongs to the RbsD / FucU family. (147 aa)    
Predicted Functional Partners:
fucI
FucI; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
  
 0.942
AFC32474.1
Carbohydrate kinase FGGY.
 
  
 0.805
AFC30969.1
Hypothetical protein.
    
 0.585
AFC31313.1
Xeg74.
       0.558
AFC32479.1
Class II aldolase/adducin family protein.
 
  
 0.508
AFC32569.1
Periplasmic binding protein/LacI transcriptional regulator.
 
   
 0.501
AFC31901.1
RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
      0.441
AFC32566.1
Periplasmic binding protein/LacI transcriptional regulator.
 
   
 0.437
AFC33365.1
Hypothetical protein.
 
   
 0.429
Your Current Organism:
Paenibacillus mucilaginosus
NCBI taxonomy Id: 1116391
Other names: P. mucilaginosus 3016, Paenibacillus mucilaginosus 3016, Paenibacillus mucilaginosus str. 3016, Paenibacillus mucilaginosus strain 3016
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