STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFC33390.1Type II secretion system protein. (401 aa)    
Predicted Functional Partners:
AFC33392.1
Type II secretion system protein E.
 
 
 0.998
AFC33389.1
Hypothetical protein.
 
  
 0.991
AFC33387.1
Fimbrial assembly family protein.
 
 
 
 0.973
AFC33391.1
Twitching motility protein.
 
  
 0.971
AFC33388.1
Peptidase A24A domain-containing protein.
 
  
 0.969
AFC32306.1
Hypothetical protein.
  
  
 0.832
AFC33386.1
Hypothetical protein.
   
 
 0.830
AFC32304.1
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.809
PM3016_92
Helicase domain-containing protein.
   
  
 0.776
AFC34035.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.706
Your Current Organism:
Paenibacillus mucilaginosus
NCBI taxonomy Id: 1116391
Other names: P. mucilaginosus 3016, Paenibacillus mucilaginosus 3016, Paenibacillus mucilaginosus str. 3016, Paenibacillus mucilaginosus strain 3016
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.