STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-4Putative ribonuclease VapC. (121 aa)    
Predicted Functional Partners:
ESS67088.1
Hypothetical protein.
   
   0.984
ESS67469.1
Putative virulence-associated protein.
  
 
 0.722
ESS67090.1
Hypothetical protein; DUF2191.
   
   0.644
ESS73625.1
Hypothetical protein.
  
     0.555
ESS68010.1
Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
   0.553
vapC-7
Putative ribonuclease VapC.
  
     0.504
ESS73162.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
   0.503
ESS71838.1
Hypothetical protein.
 
 
   0.487
ESS71273.1
Hypothetical protein; DUF2191.
 
 
   0.470
vapC-5
Putative ribonuclease VapC.
       0.457
Your Current Organism:
Methyloglobulus morosus
NCBI taxonomy Id: 1116472
Other names: M. morosus KoM1, Methylococcaceae bacterium KoM1, Methyloglobulus morosus KoM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.