STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESS72141.1Transcriptional regulator, MarR family. (153 aa)    
Predicted Functional Partners:
ESS72142.1
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.628
birA
Bifunctional protein BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.489
fadE
Acyl-coenzyme A dehydrogenase FadE.
     
 0.476
ESS72140.1
Site-specific DNA recombinase.
       0.468
bluB
Putative cob(II)yrinic acid a,c-diamide reductase BluB.
  
 
  0.465
ESS71380.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.448
ESS70610.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.448
barA
Signal transduction histidine-protein kinase BarA.
  
  
 0.445
fba
Fructose-bisphosphate aldolase Fba; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
     
 0.430
gacS
Sensor protein GacS.
  
  
 0.420
Your Current Organism:
Methyloglobulus morosus
NCBI taxonomy Id: 1116472
Other names: M. morosus KoM1, Methylococcaceae bacterium KoM1, Methyloglobulus morosus KoM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.