STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepE-2Efflux pump membrane transporter BepE. (1059 aa)    
Predicted Functional Partners:
nodT-3
Nodulation protein T.
  0.977
bepF
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.970
oprM-2
Outer membrane protein OprM.
 
  0.907
nodT
Nodulation protein T.
 
  0.901
ttgI
Toluene efflux pump outer membrane protein TtgI.
 
  0.893
ttgC
Toluene efflux pump outer membrane protein TtgC.
 
  0.889
ttgA
Putative efflux pump periplasmic linker TtgA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.883
oprM-3
Outer membrane protein OprM.
 
  0.843
mdtA-2
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.831
oprM
Outer membrane protein OprM.
 
  0.752
Your Current Organism:
Methyloglobulus morosus
NCBI taxonomy Id: 1116472
Other names: M. morosus KoM1, Methylococcaceae bacterium KoM1, Methyloglobulus morosus KoM1
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