STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpCBicarbonate transport ATP-binding protein CmpC. (601 aa)    
Predicted Functional Partners:
cmpB
Bicarbonate transport system permease protein CmpB.
  
  0.991
nrtC
Nitrate transport ATP-binding protein NrtC.
  
  0.985
appB
Oligopeptide transport system permease protein AppB.
  
 
 0.914
appC
Oligopeptide transport system permease protein AppC.
 
 
 0.910
hbpA
Heme-binding protein A.
  
 
 0.732
ESS71898.1
Response regulator.
 
     0.700
ESS71893.1
Hypothetical protein.
       0.628
narB
Nitrate reductase NarB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
  0.565
ESS71897.1
Hypothetical protein.
 
     0.564
macB-2
Macrolide export ATP-binding/permease protein MacB.
 
      0.545
Your Current Organism:
Methyloglobulus morosus
NCBI taxonomy Id: 1116472
Other names: M. morosus KoM1, Methylococcaceae bacterium KoM1, Methyloglobulus morosus KoM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.