STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG55624.1COG1344 Flagellin and related hook-associated proteins. (124 aa)    
Predicted Functional Partners:
fliS
B-type flagellar protein fliS; COG1516 Flagellin-specific chaperone FliS.
 
 
 0.923
fliD
Flagellar hook-associated 2-like protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.883
FliC
Flagellin-like protein; COG1344 Flagellin and related hook-associated proteins.
 
     0.876
flgC
COG1558 Flagellar basal body rod protein.
 
  
 0.862
flgL
COG1344 Flagellin and related hook-associated proteins.
 
  
 0.857
flgJ
Flagellar biosynthesis; COG3951 Rod binding protein.
  
  
 0.856
flgE
COG1749 Flagellar hook protein FlgE.
 
  
 0.825
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.810
fliG
Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.810
ERG52075.1
COG1291 Flagellar motor component.
 
  
 0.797
Your Current Organism:
Pseudoalteromonas spongiae
NCBI taxonomy Id: 1117319
Other names: P. spongiae UST010723-006, Pseudoalteromonas spongiae UST010723-006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.