STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG51664.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
ERG51841.1
Hypothetical protein; COG0013 Alanyl-tRNA synthetase.
  
     0.577
ERG53745.1
COG3059 Predicted membrane protein.
  
     0.538
ERG55496.1
Hypothetical protein.
  
     0.528
ERG53957.1
Hypothetical protein; COG2942 N-acyl-D-glucosamine 2-epimerase.
  
     0.523
ERG54147.1
Ser/Thr protein phosphatase; COG1409 Predicted phosphohydrolases.
  
     0.520
ERG55362.1
DEAD/DEAH box helicase; COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster.
  
     0.518
ERG53768.1
Family 3 extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.512
ERG52935.1
Hypothetical protein.
  
     0.497
ERG51932.1
ABC transporter periplasmic substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.494
ERG53298.1
ABC transporter periplasmic substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.491
Your Current Organism:
Pseudoalteromonas spongiae
NCBI taxonomy Id: 1117319
Other names: P. spongiae UST010723-006, Pseudoalteromonas spongiae UST010723-006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.