STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG52018.1Regulatory protein LysR:LysR substrate-binding; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (291 aa)    
Predicted Functional Partners:
ERG55244.1
Transcriptional regulator, LysR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.769
ERG54059.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.755
ERG52861.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.743
gcvA
Glycine cleavage operon activator; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.737
ERG53972.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.716
ERG53812.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.687
ERG52446.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.679
ERG53744.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.671
ilvY
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.663
ERG51642.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.663
Your Current Organism:
Pseudoalteromonas spongiae
NCBI taxonomy Id: 1117319
Other names: P. spongiae UST010723-006, Pseudoalteromonas spongiae UST010723-006
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