STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudCCOG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; Belongs to the Nudix hydrolase family. (319 aa)    
Predicted Functional Partners:
npdA
Putative sirtuin; COG0846 NAD-dependent protein deacetylases, SIR2 family.
  
 
 0.919
mazG
MazG family protein; COG1694 Predicted pyrophosphatase.
     
 0.913
surE
5'(3')-nucleotidase/polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
   
 
  0.910
nadD
Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
     
 0.906
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
 
 0.904
cpdB
Esterase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
    
  0.904
ushA
Bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
    
  0.904
pncC
CinA protein; COG1546 Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family.
     
 0.901
ERG53326.1
dUMP phosphatase; COG1011 Predicted hydrolase (HAD superfamily).
     
 0.901
ERG52816.1
Hydrolase; COG1011 Predicted hydrolase (HAD superfamily).
     
 0.901
Your Current Organism:
Pseudoalteromonas spongiae
NCBI taxonomy Id: 1117319
Other names: P. spongiae UST010723-006, Pseudoalteromonas spongiae UST010723-006
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