STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
BABA_01860Sulfite reductase [NADPH], flavoprotein, alpha subunit; COG3182 Uncharacterized iron-regulated membrane protein. (452 aa)    
Predicted Functional Partners:
BABA_12016
Copper resistance protein; COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.
  
    0.783
BABA_06671
Metallo-beta-lactamase domain-containing protein; COG0607 Rhodanese-related sulfurtransferase.
  
  
  0.716
cysI
Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.701
BABA_14337
Excinuclease ABC, A subunit-related protein; COG0178 Excinuclease ATPase subunit.
  
     0.692
BABA_04399
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
     
 0.681
cysH
Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.676
BABA_26071
Putative pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase.
  
  
  0.633
BABA_08926
COG2897 Rhodanese-related sulfurtransferase.
     
 0.629
hmp
Bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
    
 0.606
BABA_03069
Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators.
  
     0.527
Your Current Organism:
Bacillus bataviensis
NCBI taxonomy Id: 1117379
Other names: B. bataviensis LMG 21833, Bacillus bataviensis LMG 21833, Bacillus bataviensis str. LMG 21833, Bacillus bataviensis strain LMG 21833
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