Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M5M_02150 | M5M_12280 | M5M_02150 | M5M_12280 | Hypothetical protein. | Hypothetical protein. | 0.632 |
M5M_02150 | M5M_12285 | M5M_02150 | M5M_12285 | Hypothetical protein. | Hypothetical protein. | 0.621 |
M5M_02150 | M5M_12290 | M5M_02150 | M5M_12290 | Hypothetical protein. | Hypothetical protein. | 0.457 |
M5M_02150 | M5M_12300 | M5M_02150 | M5M_12300 | Hypothetical protein. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.515 |
M5M_02150 | M5M_12315 | M5M_02150 | M5M_12315 | Hypothetical protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.506 |
M5M_02150 | cyoE | M5M_02150 | M5M_12275 | Hypothetical protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.402 |
M5M_12255 | M5M_12270 | M5M_12255 | M5M_12270 | Putative transmembrane protein; COG0005 Purine nucleoside phosphorylase. | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | 0.495 |
M5M_12255 | M5M_12280 | M5M_12255 | M5M_12280 | Putative transmembrane protein; COG0005 Purine nucleoside phosphorylase. | Hypothetical protein. | 0.556 |
M5M_12255 | M5M_12285 | M5M_12255 | M5M_12285 | Putative transmembrane protein; COG0005 Purine nucleoside phosphorylase. | Hypothetical protein. | 0.546 |
M5M_12255 | cyoE | M5M_12255 | M5M_12275 | Putative transmembrane protein; COG0005 Purine nucleoside phosphorylase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.495 |
M5M_12270 | M5M_12255 | M5M_12270 | M5M_12255 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Putative transmembrane protein; COG0005 Purine nucleoside phosphorylase. | 0.495 |
M5M_12270 | M5M_12280 | M5M_12270 | M5M_12280 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Hypothetical protein. | 0.740 |
M5M_12270 | M5M_12285 | M5M_12270 | M5M_12285 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Hypothetical protein. | 0.821 |
M5M_12270 | M5M_12290 | M5M_12270 | M5M_12290 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Hypothetical protein. | 0.632 |
M5M_12270 | M5M_12300 | M5M_12270 | M5M_12300 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.486 |
M5M_12270 | M5M_12305 | M5M_12270 | M5M_12305 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | COG3175 Cytochrome oxidase assembly factor. | 0.711 |
M5M_12270 | M5M_12310 | M5M_12270 | M5M_12310 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.450 |
M5M_12270 | M5M_12315 | M5M_12270 | M5M_12315 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.902 |
M5M_12270 | cyoE | M5M_12270 | M5M_12275 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.902 |
M5M_12280 | M5M_02150 | M5M_12280 | M5M_02150 | Hypothetical protein. | Hypothetical protein. | 0.632 |
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